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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs13398064 chr2:239946935 A/G ING5 chr2:242626500-242668893:+ 0.6 6.27 9.72E-10 Box Plot
BLCA rs13398064 chr2:239946935 A/G PPP1R7 chr2:242088991-242123067:+ 0.67 6.79 4.3E-11 Box Plot
BLCA rs13398064 chr2:239946935 A/G XRCC5 chr2:216972187-217071026:+ 0.69 6.42 4.07E-10 Box Plot
BLCA rs13402914 chr2:101184336 C/G LOC285359 chr3:101431278-101432259:+ 0.48 9.45 3.5E-19 Box Plot
BLCA rs13418741 chr2:101184337 T/C LOC285359 chr3:101431278-101432259:+ 0.48 9.45 3.5E-19 Box Plot
BLCA rs13422218 chr2:101185189 G/T LOC285359 chr3:101431278-101432259:+ -0.4 -7.54 3.35E-13 Box Plot
BLCA rs13426215 chr2:101060773 C/T LOC285359 chr3:101431278-101432259:+ 0.4 7.41 7.92E-13 Box Plot
BLCA rs13426986 chr2:236882542 A/G AAMP chr2:219128846-219134980:- -0.62 -6.11 2.4E-9 Box Plot
BLCA rs13426986 chr2:236882542 A/G AGFG1 chr2:228336868-228425930:+ -0.5 -6.12 2.37E-9 Box Plot
BLCA rs13426986 chr2:236882542 A/G ATG16L1 chr2:234118697-234204320:+ -0.83 -7.39 9.32E-13 Box Plot
BLCA rs13426986 chr2:236882542 A/G CAB39 chr2:231577560-231685790:+ -0.5 -6.03 3.94E-9 Box Plot
BLCA rs13426986 chr2:236882542 A/G CAPN10 chr2:241526133-241557122:+ -0.53 -6.3 8.31E-10 Box Plot
BLCA rs13426986 chr2:236882542 A/G COPS7B chr2:232646381-232673964:+ -0.74 -6.86 2.81E-11 Box Plot
BLCA rs13426986 chr2:236882542 A/G COPS8 chr2:237993955-238009109:+ -0.62 -7.34 1.27E-12 Box Plot
BLCA rs13426986 chr2:236882542 A/G CUL3 chr2:225334867-225450114:- -0.76 -7.42 7.85E-13 Box Plot